Presymptomatic viral shedding in high-risk mpox contacts: A prospective cohort study brosius2023presymptomatic

Prospective cohort of 25 high-risk contacts of clade IIb monkeypox virus (MPXV) cases recruited in Antwerp, Belgium (June 24–July 31, 2022). Participants performed daily self-sampling (anorectal, genital, saliva) and attended weekly clinic visits (blood, oropharyngeal, etc.). Samples were tested by an in‑house MPXV PCR (targeting the MPXV-TNF receptor gene) on an Applied Biosystems QuantStudio. Study documents presymptomatic MPXV DNA detection (Ct values) and culture of replication-competent virus from presymptomatic anorectal samples.

Analytes

serum

MPXV detected by in-house real-time PCR targeting the MPXV-TNF receptor gene run on an Applied Biosystems QuantStudio (cycle threshold values reported). Specimen: serum collected at clinic visits.

observations for serum

Measurements only — no shedding model is fitted to this analyte, usually because it is sampled once per participant, leaving no trajectory to fit, or because nothing was ever detected. Open triangles are non-detects, drawn at the assay's censoring limit. See the modelling methods for what these estimates do and do not support.

Biomarker: mpox
Specimen: serum
Units: cycle threshold
Gene target: MPXV-TNF receptor gene
Participants: 12
Negative samples: 36
Positive samples (not quantifiable): 0
Quantifiable samples: 2
Limit of quantification: unknown
Limit of detection: 37

saliva

MPXV detected by in-house real-time PCR targeting the MPXV-TNF receptor gene run on an Applied Biosystems QuantStudio (cycle threshold values reported). Specimen: self-collected saliva.

observations for saliva

Measurements only — no shedding model is fitted to this analyte, usually because it is sampled once per participant, leaving no trajectory to fit, or because nothing was ever detected. Open triangles are non-detects, drawn at the assay's censoring limit. See the modelling methods for what these estimates do and do not support.

Biomarker: mpox
Specimen: saliva
Units: cycle threshold
Gene target: MPXV-TNF receptor gene
Participants: 12
Negative samples: 152
Positive samples (not quantifiable): 0
Quantifiable samples: 13
Limit of quantification: unknown
Limit of detection: 37

anorectal_swab

MPXV detected by in-house real-time PCR targeting the MPXV-TNF receptor gene run on an Applied Biosystems QuantStudio (cycle threshold values reported). Specimen: anorectal swab (self-collected).

observations for anorectal_swab

Measurements only — no shedding model is fitted to this analyte, usually because it is sampled once per participant, leaving no trajectory to fit, or because nothing was ever detected. Open triangles are non-detects, drawn at the assay's censoring limit. See the modelling methods for what these estimates do and do not support.

Biomarker: mpox
Specimen: anorectal swab
Units: cycle threshold
Gene target: MPXV-TNF receptor gene
Participants: 12
Negative samples: 144
Positive samples (not quantifiable): 0
Quantifiable samples: 25
Limit of quantification: unknown
Limit of detection: 37

oropharyngeal_swab

MPXV detected by in-house real-time PCR targeting the MPXV-TNF receptor gene run on an Applied Biosystems QuantStudio (cycle threshold values reported). Specimen: oropharyngeal swab collected at clinic visits.

observations for oropharyngeal_swab

Measurements only — no shedding model is fitted to this analyte, usually because it is sampled once per participant, leaving no trajectory to fit, or because nothing was ever detected. Open triangles are non-detects, drawn at the assay's censoring limit. See the modelling methods for what these estimates do and do not support.

Biomarker: mpox
Specimen: oropharyngeal swab
Units: cycle threshold
Gene target: MPXV-TNF receptor gene
Participants: 12
Negative samples: 35
Positive samples (not quantifiable): 0
Quantifiable samples: 4
Limit of quantification: unknown
Limit of detection: 37

genital_swab

MPXV detected by in-house real-time PCR targeting the MPXV-TNF receptor gene run on an Applied Biosystems QuantStudio (cycle threshold values reported). Specimen: genital swab (skin swab from coronal sulcus for men or vaginal swab for women).

gamma for genital_swab

Fitted by censored maximum likelihood. The red line is the median individual; the shaded region is the full range of a simulated cohort drawn from the fitted population, so it shows what simulating from this dataset would produce rather than a confidence interval, with dashed lines at the central 95%. Open triangles are non-detects, drawn at the censoring limit and entering the fit as "below this value" rather than being dropped. See the modelling methods for what these estimates do and do not support.

Biomarker: mpox
Specimen: genital swab
Units: cycle threshold
Gene target: MPXV-TNF receptor gene
Participants: 9
Negative samples: 62
Positive samples (not quantifiable): 0
Quantifiable samples: 17
Limit of quantification: unknown
Limit of detection: 37